Allen Cell Discussion Forum

Topic	Replies	Views	Activity
Separating zstacks into individual cells Segmenter segmentation	2	931	January 30, 2020
Segmentation error after windows update Segmenter segmentation	4	720	April 29, 2021
Using cellprofiler in place of diameterJ? Miscellaneous	2	913	November 13, 2019
Axes in Cell Feature Explorer Miscellaneous cell-feature-explorer	2	905	October 1, 2019
3D cell segmentation pipeline Miscellaneous segmentation	1	1052	August 6, 2019
Spherical harmonics for hexagonal cells Other Discussions cell-feature-explorer	3	705	June 4, 2021
Oligos for CRISPR editing from the Allen Institute Gene-editing Discussion	1	962	January 13, 2021
3D image analysis after classic segmentation Segmenter segmentation	2	764	March 23, 2021
Filling empty pixels in 3D segmentation Segmenter segmentation	1	903	May 13, 2020
Using Cell Segmenter on Cloud Server Segmenter	1	872	December 28, 2019
Matrigel dilutions hiPSC Culture Discussion matrigel	0	1230	September 26, 2018
Error when read image with AICSImage Software & Code	2	702	November 8, 2021
Culturing cells for imaging on glass hiPSC Culture Discussion	0	1176	September 26, 2018
Changing the code of playground_filament3D to support a 2D image Segmenter	1	824	August 13, 2020
Using images generated with Agave AGAVE agave	1	811	February 24, 2020
Lamin B1 Segmentation Segmenter segmentation	1	796	August 30, 2020
Fiji phenotyping help Miscellaneous	1	779	July 22, 2020
mGFP-Tagged MYL2 hiPSC Culture Discussion cardiac	1	774	November 17, 2021
Downloading package Download	1	768	March 6, 2020
Image rotation animation AGAVE	2	604	May 27, 2021
Image viewer error classic segmentation jupyter notebook Software & Code segmenter	4	467	August 15, 2024
HLA type of WTC AKA WTC11 hiPSC Culture Discussion	1	683	June 2, 2021
Weekend free protocols for iPS maintenance hiPSC Culture Discussion	3	474	April 20, 2023
ASCB Education presentation Education	0	939	January 25, 2019
Dowload of set of naturel image to extruct features from the the ISH image of developing mouse brain Miscellaneous	1	636	April 9, 2021
Dilution of Matrigel : which media? hiPSC Culture Discussion	2	510	January 19, 2023
"setup.py" not found error Segmenter getting-started , segmenter	1	621	September 9, 2021
Neuronal differentiation of Allen lines Other Discussions	1	599	April 26, 2021
hiPSC differentiation hiPSC Culture Discussion	1	597	August 6, 2021
Viewing cardiomyocyte scRNAseq data online? Gene-editing Discussion	4	374	July 6, 2023
Stem Cell Characteristic Markers hiPSC Culture Discussion	0	817	October 1, 2019
The Deadline to submit posters to the 2019 PGRN Poster Session & Reception at ASHG is tomorrow, August 31, 2019 Other Discussions events	0	805	August 30, 2019
Getting started with forum basics FAQs getting-started	0	785	July 9, 2020
Simularium Bug Report for non-GitHub users Simularium bug-report	0	751	December 16, 2020
Early Registration for ASCB ends Oct. 2! Other Discussions events	0	745	October 1, 2019
Questions about the use of AGEA Software & Code	0	733	April 4, 2022
Forum registration FAQs getting-started	0	729	July 7, 2020
Forum Navigation FAQs getting-started	0	687	July 9, 2020
Questions on AllenCellModeling/pytorch_fnet data set Software & Code	2	396	May 30, 2022
Neon 10uL vs 100uL Gene-editing Discussion	1	470	November 16, 2022
Cryo-preserving in CryoStor? hiPSC Culture Discussion	2	374	January 20, 2023
Quick Markdown guide for editing text in posts FAQs getting-started	0	647	July 20, 2020
Conflicting Matrigel instructions hiPSC Culture Discussion	1	448	November 10, 2022
Reason for Matrigel Concentration Recommended hiPSC Culture Discussion	1	444	August 16, 2023
Network wide sourcing Miscellaneous	0	622	November 11, 2020
Segmenter training data and trained models Software & Code segmenter	2	200	January 10, 2024
Facing Problems while working with AICSImage package for CZI files Other Discussions aiscimageio	4	264	April 11, 2024
Transfection control dCas9-KRAB cells Gene-editing Discussion	1	415	November 15, 2022
Choice of lines for monitoring cardiac differentiation hiPSC Culture Discussion cardiac	1	387	September 22, 2022
Lentivirus transduction Gene-editing Discussion	1	378	July 6, 2023