Allen Cell Discussion Forum

Batch processing for segmenter tool

I am using your segmenter tool and it is working quite well so far, I was just wondering if there was an option for batch processing?

Thanks!

Yes, we do. You can find a tutorial here: https://www.allencell.org/segmenter.html (see the youtube video in the middle of this page). More documentations are here: https://github.com/AllenInstitute/aics-ml-segmentation/blob/master/docs/demo_1.md

Let me know if you have more questions :slight_smile:

Super, thanks Jian Xu!